Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015808754.1_cds_XP_016495488.1_9801
CDS Infomation

[gene=LOC107814562] [db_xref=GeneID:107814562] [protein=ATP-dependent DNA helicase Q-like SIM isoform X2] [protein_id=XP_016495488.1] [location=join(39245..39387,39471..39581,41407..41596,43244..43592,44386..44612,44990..45046,46661..46741,47011..47074,47977..48076,48154..48237,48736..48823,48918..49010,49819..49911,51602..51904)] [gbkey=CDS]
Sequence

ATGCACGATCAGTGCTTGAAGTTAGCAAAACATGGTGTTTCTGCTTGCTTCCTTGGATCT
GGTCAAATTGATCGAAGTGTTGAACAAAAAGCAATGGCAGGCATGTATAGCATCATTTAT
GTATGCCCCGAGACAATTCTAAGACTCATAAAACCCATCCAAGGCCTTGCAGAAAGCCGT
GGAATTGCTCTATTTGCAATCGATGAAGTTCATTGTGTTTCTAAGTGGGGTCATGATTTT
CGACCAGATTACAGGCGATTGTCTGTTTTGAGAGAGAACTTTAGAATGGATACCATGAAG
TTTCTGAAATTTGACATACCGATCATGGCACTGACTGCCACTGCAACTACTCGTGTTCAA
GAAGACATTCTGCAGTCATTGCACATGTCAAAGGCGACACAAATTGTTCTCACTTCATTT
TTCAGGCCAAATCTTCGATTTTCAGTGAAGCACTCTAGAACATCATCTATAGAGTCCTAC
AAGAAGGATTTTCATGAATTGATAAGCACTTATTCCAAAAAAGGAAAGACTGGCAGGAAA
AGTAAGTTAATGCCCACAAATCTGGAGGAGAACTCTGAAAGCTCTGATAATGCTTCCAAT
GGTTGCATGGATGAATATAATGGAATCTATGAGGTTAATGTAGATGGCGTTGAGGGGGAT
GGCGTTTCTGATAGTGAAGACAAAGTACGTTCTCCTGGGAGATGTGGTTTGGCTTCTCTG
AAGGATAGACAATTGTCCGTTGAGTATCTGGAAGATGAGTGTGATCTTGTGCAAGATGTT
GATGATTTGGATGTTTCTTGTGGTGAATTTAGTGGAAAACTACCAACAAAAGGTTTAAGT
GGTTTTCTATTGCCCAAAGCACCTGATCTGCCCAGTAAGCCAGAGGAAAGAGCAAAGTTT
CAGCATGAACCGTTGGAAGATGGACCAACAATAATCTATGTCCCAACTAGGAAAGAAACG
TTAAGTATATCAAAATTTCTTTCTAGATCTGGGATCAAAGCTGCTGCTTACAATGCTAAG
TTGCCAAAATCACATCTAAGGCAGGTGCATAAGGAATTTCACGAGAACACGCTGCAGGTC
ATTGTCGCAACAATCGCCTTTGGTATGGGTATCGACAAGTTGAATGTGCGAAGGATCATT
CACTACGGCTGGCCCCAGAGTCTGGAGGCTTATTATCAAGAGGCTGGTCGAGCTGGTCGG
GATGGAAAAGTAGCAGAGTGTGTTCTATATGCAAACATGTCAAGAACACCGACGCTTCTA
CCAAGTCAAAGAAGTGAAGAGCAGACAAAACACGCATATAAGATGTTATCGGATTGCTTC
AGATATGGAATGAACACTTCTTGCTGTAGAGCGAAAACACTTGTGGAGTACTTCGGCGAG
CGCTTTCTTTTGGAGAAATGTCTTGTGTGTGATATATGCATCAAAGGACCACCTGAAAGG
CAGAATTTAAAGGCCGAGGCCATTATTTTCTTGCAAGTTGTTGCTACTCATTGTAGAAAT
TTTGCAGACATCTCCTATGGTGGCGATGAAGGGAGACTTGGTGAGAAGCTAAACATAAAG
GCTTTAGTCAGCAGAATAAGAGAACAGTATCAGCAATTTAGTGCAAGTGACCTCTTGTGG
TGGAGAGGTCTTGCTCGACTGTTGGAAGTTAAAGGATTCATTAGGGAGGGAGATGACATG
ACACGCGTGCAGATAAAATATCCAGAAGTAACAGAACGGGGAAGGCAGTTCCTGAGTTGT
GAAACAGAGCAGCCATTTCATGTTTATCCTGAAGCAGATATGCTGCTATCAATGAGAAGC
CCCAAGTCTTATTCCAGTTTTGCTGAATGGGGGAAAGGGTGGGCTGATCCAGAGATCCGT
CGCCAACGCTTGCAGAGAAAGCGAACATGGAAATCTCCAAGAAAACGAAAATCACGTAAA
CGTCAGCCTGATTGTAATACAGTTCGTGGAAGACTGACTGCCAAGCTATCGAAAAATAAG
TGA

Peptide Sequence

PEP ID

XP_016495488.1
PEP Infomation

PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X2 [Nicotiana tabacum]
Sequence

MHDQCLKLAKHGVSACFLGSGQIDRSVEQKAMAGMYSIIYVCPETILRLIKPIQGLAESR
GIALFAIDEVHCVSKWGHDFRPDYRRLSVLRENFRMDTMKFLKFDIPIMALTATATTRVQ
EDILQSLHMSKATQIVLTSFFRPNLRFSVKHSRTSSIESYKKDFHELISTYSKKGKTGRK
SKLMPTNLEENSESSDNASNGCMDEYNGIYEVNVDGVEGDGVSDSEDKVRSPGRCGLASL
KDRQLSVEYLEDECDLVQDVDDLDVSCGEFSGKLPTKGLSGFLLPKAPDLPSKPEERAKF
QHEPLEDGPTIIYVPTRKETLSISKFLSRSGIKAAAYNAKLPKSHLRQVHKEFHENTLQV
IVATIAFGMGIDKLNVRRIIHYGWPQSLEAYYQEAGRAGRDGKVAECVLYANMSRTPTLL
PSQRSEEQTKHAYKMLSDCFRYGMNTSCCRAKTLVEYFGERFLLEKCLVCDICIKGPPER
QNLKAEAIIFLQVVATHCRNFADISYGGDEGRLGEKLNIKALVSRIREQYQQFSASDLLW
WRGLARLLEVKGFIREGDDMTRVQIKYPEVTERGRQFLSCETEQPFHVYPEADMLLSMRS
PKSYSSFAEWGKGWADPEIRRQRLQRKRTWKSPRKRKSRKRQPDCNTVRGRLTAKLSKNK

Transcript Sequence

Gene sequence data has not been registered.